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Common sequence manipulation functions

So far, you've learned the the most common sequence manipulation functions: 

reverse()
complement()
reverseComplement()
translate()

In real life, you can manipulate really large sequences using these functions.

However, to see the value and the results of these functions in this exercise, you will use a small subset. The object zikv, which you have previously subsetted from the Zika genome, has only 30 bases.

Cet exercice fait partie du cours

Introduction to Bioconductor in R

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Instructions

Test the functions using zikv:

  • Reverse the sequence.
  • Complement of the sequence.
  • Reverse complement the sequence.
  • Translate the sequence.

Exercice interactif pratique

Essayez cet exercice en complétant cet exemple de code.

# Reverse the zikv sequence
reverse(___)

# Complement the zikv sequence
___

# Reverse complement the zikv sequence
___

# Translate the zikv sequence
___
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