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DGE Theory: Metadata

Use the information below to create a metadata data frame for the fibrosis count data called metadata with columns genotype and condition. The sample names (e.g. smoc2_fibrosis1, smoc2_fibrosis2, etc.) should be the row names of the data frame:

smoc2 metadata

Diese Übung ist Teil des Kurses

RNA-Seq with Bioconductor in R

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Anleitung zur Übung

  • Create a character vector called genotype for the above data using c().
  • Create a character vector called condition for the above data using c().
  • Create a data frame called smoc2_metadata using data.frame() and the genotype and condition character vectors.
  • Create a vector of sample names using c() and assign it to the row names of the data frame using rownames().

Interaktive Übung

Vervollständige den Beispielcode, um diese Übung erfolgreich abzuschließen.

# Create genotype vector
genotype <- c(___)

# Create condition vector
condition <- c(___)

# Create data frame
smoc2_metadata <- data.frame(___, ___)

# Assign the row names of the data frame
rownames(smoc2_metadata) <- c(___)
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