Base quality plot
This figure has been created for you from the base quality encodings of a complete fastq
file. This file uses Illumina encoding. The
maximum encoding is I
, or a score of 40. Good quality encodings have scores of 33 or above, or in other words, are B
or above.
You can see encoding details for Illumina here.
- Which scores are represented most in the figure?
This exercise is part of the course
Introduction to Bioconductor in R
Hands-on interactive exercise
Turn theory into action with one of our interactive exercises
