Interacting with IRanges
You can use the IRanges()
function to create a single sequence. You can also provide vectors to IRanges()
to create multiple sequence ranges at the same time. This is both fascinating and useful! The creation of objects seq_1
and seq_2
are examples of this.
For this exercise, check the width of each of the sequences provided here, using width()
and lengths()
. Notice the difference between the two types of outputs.
Remember that width = end - start + 1
.
This exercise is part of the course
Introduction to Bioconductor in R
Hands-on interactive exercise
Have a go at this exercise by completing this sample code.
# Create the first sequence seq_1
seq_1 <- IRanges(start = 10, end = 37)
# Create the second sequence seq_2
seq_2 <- IRanges(start = c(5, 35, 50),
end = c(12, 39, 61),
names = LETTERS[1:3])
# Check the width of seq_1 and seq_2
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