BiocManager to install packages
BSgenome is a Bioconductor data package that contains representations of several genomes. This package has already been installed for you, as installing the dependencies usually takes some time, using the following code:
# Install BSgenome
BiocManager::install("BSgenome")
This exercise is part of the course
Introduction to Bioconductor in R
Exercise instructions
- Use
library()to load the packageBSgenome. Note thatBSgenomehas already been installed for you. - Read the output messages and view the required packages.
- Check the versions of all the packages loaded in the session.
Hands-on interactive exercise
Have a go at this exercise by completing this sample code.
# Load the BSgenome package
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# Check the versions of the packages loaded in the session
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