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  3. Introduction to Bioconductor in R

Exercise

Plotting cycle average quality

Here you are! To challenge yourself, are you ready to test what you have learned by making three quick plots? You will see that now it all pays off!

It is your turn to use the new package Rqc and check multiple files at once.

Instructions 1/3

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  • 1
    • Call rqcCycleAverageQualityPlot() on the qa object.
  • 2
    • Call rqcCycleAverageQualityPlot() on qa and add theme_minimal() to change background to white.
  • 3
    • Call rqcReadQualityPlot() on qa and change the background to white.