Pinpoint center of mass
The distance transformation reveals the most embedded portions of an object. On the other hand, ndi.center_of_mass() returns the coordinates for the center of an object.
The "mass" corresponds to intensity values, with higher values pulling the center closer to it.
For this exercise, calculate the center of mass for the two labeled areas. Then, plot them on top of the image.
Latihan ini adalah bagian dari kursus
Biomedical Image Analysis in Python
Petunjuk latihan
- Using
volandlabels, calculate the center of mass for the two labeled objects. Print the coordinates. - Use
plt.scatter()to add the center of mass markers to the plot. Note that scatterplots draw from the bottom-left corner. Image columns correspond toxvalues and rows toyvalues.
Latihan interaktif praktis
Cobalah latihan ini dengan menyelesaikan kode contoh berikut.
# Extract centers of mass for objects 1 and 2
coms = ____
print('Label 1 center:', ____)
print('Label 2 center:', ____)
# Add marks to plot
for c0, c1, c2 in coms:
plt.scatter(____, ____, s=100, marker='o')
plt.show()