Understanding ChIP-seq data

Now that you have seen some examples of what CHIP-seq analyses can do, it is time for a quick recap before delving into the details of the workflow. Take a look at the following analysis goals:

  1. Measure changes in protein binding.
  2. Measure changes in gene expression.
  3. Measure changes in protein abundance.
  4. Infer changes in pathway activity.

Which of these can be achieved with a ChIP-seq experiment?

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