Exercise

Summarizing DESeq2 results

NOTE: It may take a bit longer to load this exercise.

Now that we have extracted our results, we can get a nice overview of the number of differentially expressed genes there are for our designated alpha level using the summary() function. It will output the numbers/percentages of up- and down-regulated genes, as well as, give information about independent filtering and outliers removed.

Instructions

100 XP

Check how many genes are differentially expressed in our results, smoc2_res, using DESeq2's summary() function.

Take Hint (-30 XP)