Calculate a confusion matrix
As you saw in the video, a confusion matrix is a very useful tool for calibrating the output of a model and examining all possible outcomes of your predictions (true positive, true negative, false positive, false negative).
Before you make your confusion matrix, you need to "cut" your predicted probabilities at a given threshold to turn probabilities into a factor of class predictions. Combine ifelse() with factor() as follows:
pos_or_neg <- ifelse(probability_prediction > threshold, positive_class, negative_class)
p_class <- factor(pos_or_neg, levels = levels(test_values))
confusionMatrix() in caret improves on table() from base R by adding lots of useful ancillary statistics in addition to the base rates in the table. You can calculate the confusion matrix (and the associated statistics) using the predicted outcomes as well as the actual outcomes, e.g.:
confusionMatrix(p_class, test_values)
Este ejercicio forma parte del curso
Machine Learning with caret in R
Instrucciones del ejercicio
- Use
ifelse()to create a character vector,m_or_rthat is the positive class,"M", whenpis greater than 0.5, and the negative class,"R", otherwise. - Convert
m_or_rto be a factor,p_class, with levels the same as those oftest[["Class"]]. - Make a confusion matrix with
confusionMatrix(), passingp_classand the"Class"column from thetestdataset.
Ejercicio interactivo práctico
Prueba este ejercicio y completa el código de muestra.
# If p exceeds threshold of 0.5, M else R: m_or_r
# Convert to factor: p_class
# Create confusion matrix