Visualising a Weibull model
In this exercise we will reproduce the example from the video following the steps:
- Compute Weibull model
- Decide on "imaginary patients"
- Compute survival curves
- Create
data.framewith survival curve information - Plot
We will focus now on the last two steps.
The survival, survminer, and reshape2 packages and the GBSG2 data are loaded for you in this exercise.
The Weibull model wbmod and the imaginary patient data newdat you already computed are also available.
This exercise is part of the course
Survival Analysis in R
Hands-on interactive exercise
Have a go at this exercise by completing this sample code.
# Use cbind() to combine the information in newdat with t
surv_wbmod_wide <- cbind(newdat, t)
# Use melt() to bring the data.frame to long format
surv_wbmod <- melt(surv_wbmod_wide, id.vars = c("___", "___"), variable.name = "surv_id", value.name = "___")