Session Ready
Exercise

Compute size factors

To remove technical artifacts, we want to compute size factors using the package scran.

Instructions
100 XP

  • Load scran.

  • Compute the size factors of sce using the function computeSumFactors() and assign it back to variable sce.

  • Plot a histogram of size factors using hist(). You can get size factors using the function sizeFactors() from the library SingleCellExperiment.